tmem120ab transmembrane protein 120Ab [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tmem120abprovided by ZNC
Official Full Name: transmembrane protein 120Abprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-17
See related: Ensembl:ENSDARG00000042379 AllianceGenome:ZFIN:ZDB-GENE-041010-17
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:103681
Summary: Predicted to be involved in fat cell differentiation. Predicted to be located in nuclear inner membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human TMEM120A (transmembrane protein 120A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 15

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (16873690..16884944, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (16937668..16948892, complement)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in fat cell differentiation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in nuclear inner membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Transmembrane protein 120A-like; uncharacterized protein LOC449773

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005946.2 → NP_001005946.1 Transmembrane protein 120A-like

See identical proteins and their annotated locations for NP_001005946.1

Status: PROVISIONAL

Source sequence(s)

BC083460

UniProtKB/TrEMBL

Q5XJ49

Related

ENSDARP00000062134.5, ENSDART00000062135.6

Conserved Domains (1) summary

pfam07851
Location:9 → 332

TMPIT; TMPIT-like protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007126.7 Reference GRCz11 Primary Assembly

Range

16873690..16884944 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021481387.1 → XP_021337062.1 uncharacterized protein LOC449773 isoform X1

UniProtKB/TrEMBL

A0A8M9Q0B0

Conserved Domains (1) summary

pfam07851
Location:9 → 310

TMPIT; TMPIT-like protein