Format

Send to:

Choose Destination
    • Showing Current items.

    CG10425 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43043, updated on 28-Aug-2019

    Summary

    Official Symbol
    CG10425provided by FlyBase
    Primary source
    FLYBASE:FBgn0039304
    Locus tag
    Dmel_CG10425
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10425

    Genomic context

    See CG10425 in Genome Data Viewer
    Location:
    96C8-96C8; 3-87 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25260963..25262498, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21086685..21088220, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Nucleoporin 358kD Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46099 Neighboring gene uncharacterized protein Neighboring gene Glutaminyl-tRNA synthetase Neighboring gene antisense RNA:CR45214 Neighboring gene RIO kinase 2

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    3-dehydrosphinganine reductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    3-dehydrosphinganine reductase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    3-keto-sphinganine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    sphingolipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG10425-PA
    NP_651363.1

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25260963..25262498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143106.4NP_651363.1  uncharacterized protein Dmel_CG10425 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651363.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBU5
      Related
      FBpp0084241, FBtr0084867
      Conserved Domains (2) summary
      cd08939
      Location:35271
      KDSR-like_SDR_c; 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR
      pfam00106
      Location:36229
      adh_short; short chain dehydrogenase
    Support Center