U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    sisRNA:2 stable intronic sequence RNA 2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39877404, updated on 29-Dec-2023

    Summary

    Go to the top of the page Help
    Official Symbol
    sisRNA:2provided by FlyBase
    Official Full Name
    stable intronic sequence RNA 2provided by FlyBase
    Primary source
    FLYBASE:FBgn0286040
    Locus tag
    Dmel_CR46362
    See related
    AllianceGenome:FB:FBgn0286040
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR46362; Dmel\CR46362; sisR-2; sisRNA:CR46362
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See sisRNA:2 in Genome Data Viewer
    Location:
    14F2-14F2; 1-54 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (16612777..16613274)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Ubiquitin conjugating enzyme 7 Neighboring gene uncharacterized protein Neighboring gene Nucleoporin 153kD Neighboring gene mir-4965 stem loop Neighboring gene mushroom bodies tiny Neighboring gene uncharacterized protein Neighboring gene Rho kinase Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004354.4 Chromosome X Reference Release 6 plus ISO1 MT Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Stable Intronic Sequence RNAs (sisRNAs): An Expanding Universe. Chan SN, et al. Trends Biochem Sci, 2019 Mar. PMID 30391089
    2. Maternally inherited intron coordinates primordial germ cell homeostasis during Drosophila embryogenesis. Osman I, et al. Cell Death Differ, 2021 Apr. PMID 33093656, Free PMC Article
    3. A sisRNA/miRNA Axis Prevents Loss of Germline Stem Cells during Starvation in Drosophila. Osman I, et al. Stem Cell Reports, 2018 Jul 10. PMID 30008327, Free PMC Article
    4. Maternal starvation primes progeny response to nutritional stress. Voo K, et al. PLoS Genet, 2021 Nov. PMID 34843464, Free PMC Article
    5. Generation of Drosophila sisRNAs by Independent Transcription from Cognate Introns. Jia Ng SS, et al. iScience, 2018 Jun 29. PMID 30240754, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    • alternate names: mbt sisRNA; stable intronic sequence RNA CR46362
    • sisRNA:2-RA; Dmel\sisRNA:2-RA; CR46362-RA; Dmel\CR46362-RA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      16612777..16613274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_163213.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.