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    tRNA:Lys-CTT-1-13 transfer RNA:Lysine-CTT 1-13 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772150, updated on 29-Dec-2023

    Summary

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    Official Symbol
    tRNA:Lys-CTT-1-13provided by FlyBase
    Official Full Name
    transfer RNA:Lysine-CTT 1-13provided by FlyBase
    Primary source
    FLYBASE:FBgn0052272
    Locus tag
    Dmel_CR32272
    See related
    AllianceGenome:FB:FBgn0052272
    Gene type
    tRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AAG; AE002584.trna20-LysCTT; chr3L.trna48-LysCTT; CR32272; Dmel\CR32272; tRNA-Lys-CTT-1-13; tRNA:CR32272; tRNA:K2; tRNA:K2:63B; tRNA:K:CTT:AE002584-b; tRNA:lys2:63B; tRNA[Lys][[2]]
    Summary
    Predicted to enable AAG codon-amino acid adaptor activity. Predicted to be involved in translation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    63B1-63B1; 3-6 cM
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (3096891..3096963, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (3096891..3096963, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Chitinase 7 Neighboring gene transfer RNA:Cysteine-GCA 1-3 Neighboring gene transfer RNA:Lysine-CTT 1-12 Neighboring gene transfer RNA:Cysteine-GCA 1-4 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conservatism of sites of tRNA loci among the linkage groups of several Drosophila species. Tonzetich J, et al. J Mol Evol, 1990 Feb. PMID 2107332
    2. Hybridization of tRNAs of Drosophila melanogaster to polytene chromosomes. Hayashi S, et al. Chromosoma, 1980. PMID 6766853
    3. Novel TRF1/BRF target genes revealed by genome-wide analysis of Drosophila Pol III transcription. Isogai Y, et al. EMBO J, 2007 Jan 10. PMID 17170711, Free PMC Article
    4. Integrated tRNA, transcript, and protein profiles in response to steroid hormone signaling. Van Bortle K, et al. RNA, 2015 Oct. PMID 26289344, Free PMC Article
    5. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Chan PP, et al. Nucleic Acids Res, 2016 Jan 4. PMID 26673694, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    • alternate names: transfer RNA:lys2:63B; transfer RNA:CR32272
    • tRNA:Lys-CTT-1-13-RA; Dmel\tRNA:Lys-CTT-1-13-RA; CR32272-RA; Dmel\CR32272-RA

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables AAG codon-amino acid adaptor activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables triplet codon-amino acid adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IC
    Inferred by Curator
    more info
    		 PubMed 
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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