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    salto [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36332, updated on 27-Mar-2024

    Summary

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    Official Symbol
    saltoprovided by FlyBase
    Primary source
    FLYBASE:FBgn0061197
    Locus tag
    Dmel_CG13164
    See related
    AllianceGenome:FB:FBgn0061197
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13164; Dmel\CG13164; sal; Sip2; SIP2
    Summary
    Is expressed in adult head; scolopidial dendrite; spermatid; spermatocyte; and spermatozoon. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    48F6-48F6; 2-66 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (12302544..12306269, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (8190049..8193774, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45271 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. salto/CG13164 is required for sperm head morphogenesis in Drosophila. Augière C, et al. Mol Biol Cell, 2019 Mar 1. PMID 30601696, Free PMC Article
    2. Survival motor neuron protein regulates stem cell division, proliferation, and differentiation in Drosophila. Grice SJ, et al. PLoS Genet, 2011 Apr. PMID 21490958, Free PMC Article
    3. Cell competition removes segmental aneuploid cells from Drosophila imaginal disc-derived tissues based on ribosomal protein gene dose. Ji Z, et al. Elife, 2021 Apr 13. PMID 33847264, Free PMC Article
    4. Drosophila HP1c isoform interacts with the zinc-finger proteins WOC and Relative-of-WOC to regulate gene expression. Font-Burgada J, et al. Genes Dev, 2008 Nov 1. PMID 18981478, Free PMC Article
    5. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    salto
    Names
    CG13164-PA
    CG13164-PC
    CG13164-PE
    CG13164-PG
    salto-PA
    salto-PC
    salto-PE
    salto-PG
    syntaxin Interact. Prot. 2
    syntaxin interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      12302544..12306269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165874.2 → NP_725125.1  salto, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725125.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8W3
      Related
      FBpp0088613
      Conserved Domains (1) summary
      pfam07798
      Location:313 → 422
      DUF1640; Protein of unknown function (DUF1640)

    2. NM_176152.2 → NP_788332.1  salto, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788332.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8W3
      Related
      FBpp0088610
      Conserved Domains (1) summary
      pfam07798
      Location:313 → 422
      DUF1640; Protein of unknown function (DUF1640)

    3. NM_136912.3 → NP_610756.2  salto, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610756.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8W1
      Related
      FBpp0088611
      Conserved Domains (3) summary
      COG1357
      Location:713 → 803
      YjbI; Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
      pfam07798
      Location:313 → 422
      DUF1640; Protein of unknown function (DUF1640)
      cl12013
      Location:518 → 670
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    4. NM_165873.3 → NP_725124.1  salto, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725124.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z8W2
      Related
      FBpp0088612
      Conserved Domains (2) summary
      pfam07798
      Location:313 → 422
      DUF1640; Protein of unknown function (DUF1640)
      cl12013
      Location:518 → 670
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z8W1 A1Z8W1
    A1Z8W2 A1Z8W2
    A1Z8W3 A1Z8W3
    Q95TC3 Q95TC3

    Gene LinkOut

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