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    Y42A5A.5 Complex 1 LYR protein domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565757, updated on 23-Nov-2023

    Summary

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    Gene symbol
    Y42A5A.5
    Gene description
    Complex 1 LYR protein domain-containing protein
    Primary source
    WormBase:WBGene00012780
    Locus tag
    CELE_Y42A5A.5
    See related
    AllianceGenome:WB:WBGene00012780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in respiratory electron transport chain. Predicted to be active in mitochondrion. Orthologous to human ETFRF1 (electron transfer flavoprotein regulatory factor 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (11107535..11109747, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Aminopeptidase Neighboring gene FMRF-Like Peptide Neighboring gene ncRNA Neighboring gene Cyclin-dependent kinase-like 1;Protein kinase domain-containing protein Neighboring gene pseudo Neighboring gene Tr-type G domain-containing protein;Translation elongation factor EFTu/EF1A C-terminal domain-containing protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase 7 Neighboring gene MRG domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in respiratory electron transport chain IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Complex 1 LYR protein domain-containing protein
    NP_001024237.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11107535..11109747 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001029066.3 → NP_001024237.2  Complex 1 LYR protein domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024237.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YWR3
      Conserved Domains (1) summary
      pfam05347
      Location:5 → 61
      Complex1_LYR; Complex 1 protein (LYR family)
    Nucleotide Protein
    Heading Accession and Version

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