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    CG13693 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33187, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG13693provided by FlyBase
    Primary source
    FLYBASE:FBgn0031235
    Locus tag
    Dmel_CG13693
    See related
    AllianceGenome:FB:FBgn0031235
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13693
    Summary
    Predicted to be involved in cilium assembly. Predicted to be active in axoneme and ciliary basal body. Orthologous to human CCDC113 (coiled-coil domain containing 113). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    21B5-21B5; 2-0.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (232487..234208)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (232487..234208)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene kismet Neighboring gene long non-coding RNA:CR44221 Neighboring gene ncRNA Neighboring gene mir-965 stem loop Neighboring gene long non-coding RNA:CR44218

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    2. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cilium assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in axoneme IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in ciliary basal body IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13693-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      232487..234208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134661.2 → NP_608505.1  uncharacterized protein Dmel_CG13693 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608505.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T3H6, Q9VPL8
      Related
      FBpp0077785
      Conserved Domains (1) summary
      pfam13870
      Location:258 → 432
      DUF4201; Domain of unknown function (DUF4201)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T3H6 Q8T3H6
    Q9VPL8 Q9VPL8

    Gene LinkOut

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