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    CG15365 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31829, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG15365provided by FlyBase
    Primary source
    FLYBASE:FBgn0030077
    Locus tag
    Dmel_CG15365
    See related
    AllianceGenome:FB:FBgn0030077
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15365
    Summary
    Human ortholog(s) of this gene implicated in esophageal cancer and squamous cell carcinoma. Orthologous to several human genes including LZTS3 (leucine zipper tumor suppressor family member 3). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    8C4-8C4; 1-26 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9054698..9067983, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8948731..8962016, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene retinal degeneration A Neighboring gene long non-coding RNA:CR43836 Neighboring gene mir-31b stem loop Neighboring gene Nostrin Neighboring gene antisense RNA:CR45538 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Genetic Architecture of Natural Variation in Recombination Rate in Drosophila melanogaster. Hunter CM, et al. PLoS Genet, 2016 Apr. PMID 27035832, Free PMC Article
    2. Transcriptional dynamics elicited by a short pulse of notch activation involves feed-forward regulation by E(spl)/Hes genes. Housden BE, et al. PLoS Genet, 2013. PMID 23300480, Free PMC Article
    3. Drosophila glia: Few cell types and many conserved functions. Yildirim K, et al. Glia, 2019 Jan. PMID 30443934
    4. Neurological proteins are not enriched for repetitive sequences. Huntley MA, et al. Genetics, 2004 Mar. PMID 15082536, Free PMC Article
    5. Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations. Winbush A, et al. Genome Biol Evol, 2021 Jan 7. PMID 33247719, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15365-PA
    CG15365-PB
    CG15365-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      9054698..9067983 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132288.2 → NP_572516.1  uncharacterized protein Dmel_CG15365, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572516.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W3A1
      Related
      FBpp0071292
      Conserved Domains (1) summary
      pfam15290
      Location:479 → 511
      Syntaphilin; Golgi-localized syntaxin-1-binding clamp

    2. NM_001298101.1 → NP_001285030.1  uncharacterized protein Dmel_CG15365, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285030.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JD14
      Conserved Domains (1) summary
      pfam15290
      Location:486 → 518
      Syntaphilin; Golgi-localized syntaxin-1-binding clamp

    3. NM_001298102.1 → NP_001285031.1  uncharacterized protein Dmel_CG15365, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285031.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W3A1
      Conserved Domains (1) summary
      pfam15290
      Location:479 → 511
      Syntaphilin; Golgi-localized syntaxin-1-binding clamp
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W3A1 Q9W3A1
    X2JD14 X2JD14

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