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    idh1 isocitrate dehydrogenase (NAD+) subunit 1 Idh1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541894, updated on 9-Jun-2019

    Summary

    Gene symbol
    idh1
    Gene description
    isocitrate dehydrogenase (NAD+) subunit 1 Idh1
    Primary source
    PomBase:SPAC11G7.03
    Locus tag
    SPAC11G7.03
    Gene type
    protein coding
    RNA name
    isocitrate dehydrogenase (NAD+) subunit 1 Idh1
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    glu3

    Genomic context

    See idh1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (3966740..3968132)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene HECT-type ubiquitin-protein ligase E3 Pub1 Neighboring gene putative S-malonyltransferase Mct1 Neighboring gene ubiquitin-60S ribosomal protein L40 fusion protein Neighboring gene hypothetical protein Neighboring gene miscRNA Neighboring gene tRNA (guanine) methyltransferase Trm5

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    • Homologs of the idh1 gene: The idh1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    NAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    isocitrate dehydrogenase (NAD+) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    isocitrate dehydrogenase (NAD+) activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    isocitrate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    isocitrate metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    tricarboxylic acid cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    tricarboxylic acid cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm HDA PubMed 
    mitochondrial matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    isocitrate dehydrogenase (NAD+) subunit 1 Idh1
    NP_594397.1

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3966740..3968132
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019820.2NP_594397.1  isocitrate dehydrogenase (NAD+) subunit 1 Idh1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594397.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13696
      Conserved Domains (1) summary
      TIGR00175
      Location:18353
      mito_nad_idh; isocitrate dehydrogenase, NAD-dependent, mitochondrial type
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