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    SPBC17A3.08 deoxyribonuclease Tat-D [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539901, updated on 13-Mar-2024

    Summary

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    Gene symbol
    SPBC17A3.08
    Gene description
    deoxyribonuclease Tat-D
    Locus tag
    SPBC17A3.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003423.3 (1416205..1417863)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative phosphoprotein phosphatase Neighboring gene glutathione reductase Pgr1 Neighboring gene putative lipoate-protein ligase A Neighboring gene putative peroxin pas4 Neighboring gene putative RINT1 family protein Neighboring gene putative palmitoyltransferase Pfa5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    2. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables 3'-5'-DNA exonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA catabolic process IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    deoxyribonuclease Tat-D

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1416205..1417863
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021486.2 → NP_595590.1  deoxyribonuclease Tat-D [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595590.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13630, Q9UUF1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials