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    lncRNA:CR43440 long non-coding RNA:CR43440 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 19835443, updated on 29-Dec-2023

    Summary

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    Official Symbol
    lncRNA:CR43440provided by FlyBase
    Official Full Name
    long non-coding RNA:CR43440provided by FlyBase
    Primary source
    FLYBASE:FBgn0263388
    Locus tag
    Dmel_CR43440
    See related
    AllianceGenome:FB:FBgn0263388
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG43440; CR43440; Dmel\CR43440
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    Genomic context

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    Location:
    98D6-98D6; 3-96 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28593488..28594283)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24419210..24420005)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene fork head Neighboring gene long non-coding RNA:CR43126 Neighboring gene ncRNA Neighboring gene Noa36 Neighboring gene Heterogeneous nuclear ribonucleoprotein at 98DE

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila. Nyberg KG, et al. Genome Biol Evol, 2016 Jun 27. PMID 27189981, Free PMC Article
    2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • lncRNA:CR43440-RB; Dmel\lncRNA:CR43440-RB; CR43440-RB; Dmel\CR43440-RB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      28593488..28594283
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_125283.1 RNA Sequence

      Status: REVIEWED

    Gene LinkOut

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