U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    asic-1 Degenerin-like protein asic-1 [ Caenorhabditis elegans ]

    Gene ID: 191422, updated on 11-Apr-2024

    Summary

    Gene symbol
    asic-1
    Gene description
    Degenerin-like protein asic-1
    Primary source
    WormBase:WBGene00022815
    Locus tag
    CELE_ZK770.1
    See related
    AllianceGenome:WB:WBGene00022815
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable acid-sensing ion channel activity. Involved in positive regulation of dopamine secretion. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in neurons. Human ortholog(s) of this gene implicated in Liddle syndrome; autosomal recessive pseudohypoaldosteronism type 1; bronchiectasis 1; bronchiectasis 3; and pseudohypoaldosteronism. Orthologous to human SCNN1B (sodium channel epithelial 1 subunit beta) and SCNN1G (sodium channel epithelial 1 subunit gamma). [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: I
    Exon count:
    16
    Sequence:
    Chromosome: I; NC_003279.8 (3769672..3774005)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Innexin Neighboring gene Innexin-12 Neighboring gene Uncharacterized protein Neighboring gene AMP-binding domain-containing protein;AMP-dependent synthetase/ligase domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Resistance to inhibitors of cholinesterase protein 19

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ligand-gated sodium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables pH-gated monoatomic ion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to pH ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of dopamine secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in protein homotrimerization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sodium ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sodium ion transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    Degenerin-like protein asic-1
    NP_491214.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3769672..3774005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058813.5NP_491214.3  Degenerin-like protein asic-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491214.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O01635
      Conserved Domains (3) summary
      TIGR00867
      Location:16779
      deg-1; degenerin
      pfam00858
      Location:17104
      ASC; Amiloride-sensitive sodium channel
      cl02990
      Location:469788
      ASC; Amiloride-sensitive sodium channel