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    ttbk-3 Protein kinase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185199, updated on 23-Nov-2023

    Summary

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    Gene symbol
    ttbk-3
    Gene description
    Protein kinase domain-containing protein
    Primary source
    WormBase:WBGene00009324
    Locus tag
    CELE_F32B6.10
    See related
    AllianceGenome:WB:WBGene00009324
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in neurons. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See ttbk-3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    9
    Sequence:
    Chromosome: IV; NC_003282.8 (9887146..9889957, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Nuclear hormone receptor family member nhr-4 Neighboring gene Pre-mRNA-splicing factor 18 Neighboring gene ncRNA Neighboring gene Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial Neighboring gene SH2 domain-containing protein Neighboring gene Sperm-Specific family, class S

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Forward Genetic Screen for Molecules Involved in Pheromone-Induced Dauer Formation in Caenorhabditis elegans. Neal SJ, et al. G3 (Bethesda), 2016 May 3. PMID 26976437, Free PMC Article
    2. Genomic overview of protein kinases. Manning G. WormBook, 2005 Dec 13. PMID 18050405, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in peptidyl-serine phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase domain-containing protein
    NP_001293885.1
    • Partially confirmed by transcript evidence
    NP_501778.4
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9887146..9889957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069377.5 → NP_501778.4  Protein kinase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501778.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XVP6
      Conserved Domains (1) summary
      cl21453
      Location:86 → 351
      PKc_like; Protein Kinases, catalytic domain

    2. NM_001306956.3 → NP_001293885.1  Protein kinase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293885.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A061ACJ5
      Conserved Domains (1) summary
      cl21453
      Location:86 → 351
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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