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    pgp-3 Multidrug resistance protein pgp-3 [ Caenorhabditis elegans ]

    Gene ID: 181326, updated on 11-Apr-2024

    Summary

    Gene symbol
    pgp-3
    Gene description
    Multidrug resistance protein pgp-3
    Primary source
    WormBase:WBGene00003997
    Locus tag
    CELE_ZK455.7
    See related
    AllianceGenome:WB:WBGene00003997
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ATPase-coupled transmembrane transporter activity and efflux transmembrane transporter activity. Involved in defense response to Gram-negative bacterium; innate immune response; and stress response to cadmium ion. Located in apical plasma membrane. Is expressed in excretory cell; intestine; pharynx; and reproductive system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); cholestasis (multiple); human immunodeficiency virus infectious disease (multiple); and leukemia (multiple). Orthologous to human ABCB1 (ATP binding cassette subfamily B member 1); ABCB4 (ATP binding cassette subfamily B member 4); and ABCB5 (ATP binding cassette subfamily B member 5). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    chromosome: X
    Exon count:
    13
    Sequence:
    Chromosome: X; NC_003284.9 (11352156..11357094)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Cytoplasmic aconitate hydratase Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene P-GlycoProtein related Neighboring gene ncRNA Neighboring gene Protein tweety homolog 1

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ABC-type xenobiotic transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATPase-coupled transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables efflux transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in defense response to Gram-negative bacterium IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in innate immune response IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in response to metal ion IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in stress response to cadmium ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in xenobiotic transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Multidrug resistance protein pgp-3
    NP_509901.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11352156..11357094
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077500.5NP_509901.1  Multidrug resistance protein pgp-3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509901.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34713, Q20335
      Conserved Domains (3) summary
      cd03249
      Location:10291266
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:1051264
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:50326
      ABC_membrane; ABC transporter transmembrane region