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    F33G12.3 DUF1308 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173868, updated on 17-May-2023

    Summary

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    Gene symbol
    F33G12.3
    Gene description
    DUF1308 domain-containing protein
    Primary source
    WormBase:WBGene00018015
    Locus tag
    CELE_F33G12.3
    See related
    AllianceGenome:WB:WBGene00018015
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human C7orf25 (chromosome 7 open reading frame 25). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (5031825..5034035, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Mitogen-activated protein kinase kinase kinase nsy-1;mitogen-activated protein kinase kinase kinase Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene tRNA-Ile Neighboring gene Leucine-Rich Repeat protein Neighboring gene Golgin subfamily A conserved domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DUF1308 domain-containing protein
    NP_494927.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5031825..5034035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062526.9 → NP_494927.1  DUF1308 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494927.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19987
      Conserved Domains (1) summary
      pfam07000
      Location:41 → 393
      DUF1308; Protein of unknown function (DUF1308)
    Nucleotide Protein
    Heading Accession and Version

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