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    asRNA:CR43872 antisense RNA:CR43872 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 14462890, updated on 29-Dec-2023

    Summary

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    Official Symbol
    asRNA:CR43872provided by FlyBase
    Official Full Name
    antisense RNA:CR43872provided by FlyBase
    Primary source
    FLYBASE:FBgn0264464
    Locus tag
    Dmel_CR43872
    See related
    AllianceGenome:FB:FBgn0264464
    Gene type
    ncRNA
    RNA name
    antisense_RNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG43872; CR43872; Dmel\CR43872
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    Genomic context

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    Location:
    77B2-77B2; 3-47 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20299410..20302295)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20292510..20295395)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene golden goal Neighboring gene long non-coding RNA:CR43890 Neighboring gene FSHD region gene 1 Neighboring gene Peroxin 23 Neighboring gene Squamous cell carcinoma-related oncogene 4 Neighboring gene uncharacterized protein Neighboring gene polo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
    2. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • asRNA:CR43872-RA; Dmel\asRNA:CR43872-RA; CR43872-RA; Dmel\CR43872-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20299410..20302295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_073956.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases