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    KMT2CP5 lysine methyltransferase 2C pseudogene 5 [ Homo sapiens (human) ]

    Gene ID: 107985798, updated on 10-Oct-2023

    Summary

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    Official Symbol
    KMT2CP5provided by HGNC
    Official Full Name
    lysine methyltransferase 2C pseudogene 5provided by HGNC
    Primary source
    HGNC:HGNC:56183
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    2p11.2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (91686102..91712110, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (91875829..91901845, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (91874128..91900136, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene LSP1 pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91846385-91847216 Neighboring gene RNA, 5S ribosomal pseudogene 100 Neighboring gene dopamine receptor D5 pseudogene 1 Neighboring gene NKAIN1 pseudogene 2 Neighboring gene NANOG hESC enhancer GRCh37_chr2:91921621-91922171 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:91926707-91927208 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:91932671-91933268 Neighboring gene IGSF3 pseudogene 2 Neighboring gene KMT5A pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_171627.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC027612

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      91686102..91712110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      91875829..91901845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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