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    mipep mitochondrial intermediate peptidase [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100497804, updated on 8-Mar-2024

    Summary

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    Official Symbol
    mipepprovided by Xenbase
    Official Full Name
    mitochondrial intermediate peptidaseprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1006661
    See related
    Ensembl:ENSXETG00000009705
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See mipep in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (156786016..156825203)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (153721892..153760623)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101730439 Neighboring gene C1q and TNF related 9B Neighboring gene adiponectin Neighboring gene tumor necrosis factor receptor superfamily member 19 Neighboring gene sacsin molecular chaperone

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrial intermediate peptidase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      156786016..156825203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004912062.4 → XP_004912119.1  mitochondrial intermediate peptidase isoform X1

      UniProtKB/TrEMBL
      A0A6I8S626, F6WFK8
      Related
      ENSXETP00000021375.2, ENSXETT00000021375.3
      Conserved Domains (1) summary
      cd06457
      Location:55 → 688
      M3A_MIP; Peptidase M3 mitochondrial intermediate peptidase (MIP)

    2. XM_002938576.5 → XP_002938622.2  mitochondrial intermediate peptidase isoform X2

      UniProtKB/TrEMBL
      A0A6I8S626, A0A8J0QV23
      Conserved Domains (2) summary
      cd06457
      Location:55 → 685
      M3A_MIP; Peptidase M3 mitochondrial intermediate peptidase (MIP)
      COG0339
      Location:65 → 681
      Dcp; Zn-dependent oligopeptidase [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein Strain
    Heading Accession and Version

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