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    grin2d glutamate receptor, ionotropic, N-methyl D-aspartate 2D [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100496465, updated on 8-Mar-2024

    Summary

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    Official Symbol
    grin2dprovided by Xenbase
    Official Full Name
    glutamate receptor, ionotropic, N-methyl D-aspartate 2Dprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1011863
    See related
    Ensembl:ENSXETG00000010593
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    eb11; nr2d; nmdar2d
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (115378407..115511848, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (107415127..107550120, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol polyphosphate 5-phosphatase type IV-like Neighboring gene phosphatidylinositol polyphosphate 5-phosphatase type IV-like Neighboring gene KDEL endoplasmic reticulum protein retention receptor 1 Neighboring gene synaptogyrin 4 Neighboring gene transmembrane protein 143

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmitter-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glutamate receptor ionotropic, NMDA 2D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      115378407..115511848 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031906599.1 → XP_031762459.1  glutamate receptor ionotropic, NMDA 2D

      UniProtKB/TrEMBL
      A0A6I8T1M1, A0A8J1JX42
      Related
      ENSXETP00000101091.2, ENSXETT00000099943.2
      Conserved Domains (3) summary
      cd13718
      Location:406 → 807
      PBP2_iGluR_NMDA_Nr2; The ligand-binding domain of the NR2 subunit of ionotropic NMDA (N-methyl-D-aspartate) glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
      cd06378
      Location:38 → 390
      PBP1_iGluR_NMDA_NR2; N-terminal leucine-isoleucine-valine-binding protein (LIVBP)-like domain of the NR2 subunit of NMDA receptor family
      pfam10565
      Location:844 → 873
      NMDAR2_C; N-methyl D-aspartate receptor 2B3 C-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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