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    ppie peptidylprolyl isomerase E (cyclophilin E) [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495035, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ppieprovided by Xenbase
    Official Full Name
    peptidylprolyl isomerase E (cyclophilin E)provided by Xenbase
    Primary source
    Xenbase:XB-GENE-979639
    See related
    Ensembl:ENSXETG00000010944
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    cype; cyp33; cyp-33
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (91052207..91062414)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (86935556..86946073)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA55 Neighboring gene poly(A) binding protein cytoplasmic 4 Neighboring gene small nucleolar RNA SNORA55 Neighboring gene bone morphogenetic protein 8 (osteogenic protein 2) Neighboring gene lysophosphatidic acid receptor 1-A-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase E
    Names
    cyclophilin E

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      91052207..91062414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002941652.4 → XP_002941698.1  peptidyl-prolyl cis-trans isomerase E isoform X2

      UniProtKB/TrEMBL
      A0A5S6NHG9, A0A6I8QDH7
      Related
      ENSXETP00000070464.2, ENSXETT00000099248.2
      Conserved Domains (2) summary
      cd01926
      Location:140 → 298
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cd12347
      Location:8 → 80
      RRM_PPIE; RNA recognition motif in cyclophilin-33 (Cyp33) and similar proteins

    2. XM_004911620.4 → XP_004911677.1  peptidyl-prolyl cis-trans isomerase E isoform X3

      UniProtKB/TrEMBL
      A0A6I8SFC4, A0A8J0R0S9
      Conserved Domains (2) summary
      cd01926
      Location:74 → 232
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cl17169
      Location:1 → 14
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_004911619.4 → XP_004911676.2  peptidyl-prolyl cis-trans isomerase E isoform X1

      UniProtKB/TrEMBL
      A0A6I8QDI9, F7EEK8
      Related
      ENSXETP00000023913.5, ENSXETT00000023913.5
      Conserved Domains (2) summary
      cd01926
      Location:158 → 316
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cd12347
      Location:30 → 100
      RRM_PPIE; RNA recognition motif (RRM) found in cyclophilin-33 (Cyp33) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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