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    chsy3 chondroitin sulfate synthase 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100494038, updated on 8-Mar-2024

    Summary

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    Official Symbol
    chsy3provided by Xenbase
    Official Full Name
    chondroitin sulfate synthase 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-980444
    See related
    Ensembl:ENSXETG00000037570
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    css3; chsy2
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (167042049..167215916, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (158648073..158662864, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 17 Neighboring gene LYR motif containing 7 Neighboring gene histidine triad nucleotide binding protein 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables acetylgalactosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    chondroitin sulfate synthase 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      167042049..167215916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031892940.1 → XP_031748800.1  chondroitin sulfate synthase 3

      UniProtKB/TrEMBL
      A0A6I8RY69
      Related
      ENSXETP00000087638.2, ENSXETT00000093479.2
    Nucleotide Protein Strain
    Heading Accession and Version

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