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    ascl1 achaete-scute family bHLH transcription factor 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490701, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ascl1provided by Xenbase
    Official Full Name
    achaete-scute family bHLH transcription factor 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1032967
    See related
    Ensembl:ENSXETG00000041303
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    ash1; Mash1; Xash1
    Orthologs
    human mouse all
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    Genomic context

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    See ascl1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (49705685..49708098, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (40181810..40184203, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene stabilin 2 Neighboring gene uncharacterized LOC105946897 Neighboring gene chromosome 3 C12orf42 homolog Neighboring gene phenylalanine hydroxylase Neighboring gene tyrosine hydroxylase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    achaete-scute homolog 1
    Names
    achaete-scute complex homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      49705685..49708098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002944602.3 → XP_002944648.3  achaete-scute homolog 1

      UniProtKB/TrEMBL
      A0A6I8T0M6
      Related
      ENSXETP00000099680.2, ENSXETT00000101576.2
      Conserved Domains (1) summary
      cd19742
      Location:78 → 148
      bHLH_TS_ASCL1_Mash1; basic helix-loop-helix (bHLH) domain found in achaete-scute-like protein 1 (ASCL-1) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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