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    LOC100490020 uncharacterized LOC100490020 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490020, updated on 7-Sep-2023

    Summary

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    Official Symbol
    LOC100490020provided by Xenbase
    Official Full Name
    uncharacterized LOC100490020provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29080007
    See related
    Ensembl:ENSXETG00000040622
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (100053512..100062099)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (110885694..110894165, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 150 Neighboring gene uncharacterized LOC101732574 Neighboring gene ATP binding cassette subfamily F member 3 Neighboring gene matrix metalloproteinase-23

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100490020

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      100053512..100062099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002935153.5 → XP_002935199.3  uncharacterized protein LOC100490020

      UniProtKB/TrEMBL
      A0A6I8S3V4, A0A803J9X2
      Related
      ENSXETP00000104679.1, ENSXETT00000106225.1
      Conserved Domains (1) summary
      cl40440
      Location:166 → 371
      PDDEXK_nuclease-like; PDDEXK family nucleases
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases