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    rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488581, updated on 8-Mar-2024

    Summary

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    Official Symbol
    rab3gap1provided by Xenbase
    Official Full Name
    RAB3 GTPase activating protein catalytic subunit 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-995561
    See related
    Ensembl:ENSXETG00000000480
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (84342532..84387110, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (79010500..79045224, complement)

    Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-128-1 Neighboring gene R3H domain containing 1 Neighboring gene zinc finger RAN-binding domain containing 3 Neighboring gene mitogen-activated protein kinase kinase kinase 19 Neighboring gene uncharacterized LOC105948462 Neighboring gene cyclin T2 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    rab3 GTPase-activating protein catalytic subunit
    Names
    RAB3 GTPase activating protein subunit 1 (catalytic)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      84342532..84387110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031892939.1 → XP_031748799.1  rab3 GTPase-activating protein catalytic subunit

      UniProtKB/TrEMBL
      A0A6I8QTD9, A0A6I8T0T2, A0A7D9NKN1
      Related
      ENSXETP00000072874.2, ENSXETT00000074021.2
      Conserved Domains (1) summary
      pfam13890
      Location:610 → 764
      Rab3-GTPase_cat; Rab3 GTPase-activating protein catalytic subunit
    Nucleotide Protein Strain
    Heading Accession and Version

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