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    pid1 phosphotyrosine interaction domain containing 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100485427, updated on 8-Mar-2024

    Summary

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    Official Symbol
    pid1provided by Xenbase
    Official Full Name
    phosphotyrosine interaction domain containing 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-960454
    See related
    Ensembl:ENSXETG00000014759
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (128967518..129009783, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (125345298..125386885, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene thiamine transporter 2 Neighboring gene mitochondrial fission factor Neighboring gene delta/notch like EGF repeat containing Neighboring gene thyroid hormone receptor interactor 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of insulin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of mitochondrial membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PTB-containing, cubilin and LRP1-interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      128967518..129009783 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004917824.4 → XP_004917881.1  PTB-containing, cubilin and LRP1-interacting protein

      UniProtKB/TrEMBL
      A0A6I8QMP0, F7CNF3
      Related
      ENSXETP00000070886.1, ENSXETT00000087305.2
      Conserved Domains (1) summary
      cd13167
      Location:56 → 194
      PTB_P-CLI1; PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like fold
    Nucleotide Protein Strain
    Heading Accession and Version

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