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    serp2 stress-associated endoplasmic reticulum protein family member 2 [ Danio rerio (zebrafish) ]

    Gene ID: 100319240, updated on 27-Mar-2024

    Summary

    Official Symbol
    serp2provided by ZNC
    Official Full Name
    stress-associated endoplasmic reticulum protein family member 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081104-143
    See related
    Ensembl:ENSDARG00000094003 AllianceGenome:ZFIN:ZDB-GENE-081104-143
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-161h23.3
    Summary
    Predicted to be involved in endoplasmic reticulum unfolded protein response and protein glycosylation. Predicted to act upstream of or within protein transport. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human SERP2 (stress associated endoplasmic reticulum protein family member 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (18716485..18721414)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (18708773..18713702)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene ecto-NOX disulfide-thiol exchanger 1 Neighboring gene laccase (multicopper oxidoreductase) domain containing 1 Neighboring gene TSC22 domain family, member 1 Neighboring gene general transcription factor IIF, polypeptide 2b Neighboring gene potassium channel tetramerization domain containing 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    stress-associated endoplasmic reticulum protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001302477.1NP_001289406.1  stress-associated endoplasmic reticulum protein 2

      See identical proteins and their annotated locations for NP_001289406.1

      Status: VALIDATED

      Source sequence(s)
      EH434448, EH584072
      UniProtKB/TrEMBL
      A0A8M1P1L7, B0V1G1
      Related
      ENSDARP00000112726.1, ENSDART00000135125.2
      Conserved Domains (1) summary
      pfam06624
      Location:258
      RAMP4; Ribosome associated membrane protein RAMP4

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      18716485..18721414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)