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    man1a2 mannosidase, alpha, class 1A, member 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100216029, updated on 8-Mar-2024

    Summary

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    Official Symbol
    man1a2provided by Xenbase
    Official Full Name
    mannosidase, alpha, class 1A, member 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1010312
    See related
    Ensembl:ENSXETG00000009907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    man1b
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (2789319..2816439)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683806.1 (42953..66593, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene BOC cell adhesion associated, oncogene regulated Neighboring gene cilia and flagella associated protein 44 Neighboring gene uncharacterized LOC105945835 Neighboring gene terminal nucleotidyltransferase 5C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within determination of heart left/right asymmetry IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within determination of liver left/right asymmetry IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within determination of pancreatic left/right asymmetry IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within intrahepatic bile duct development IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mannosyl-oligosaccharide 1,2-alpha-mannosidase IB

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      2789319..2816439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002943445.3 → XP_002943491.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB

      UniProtKB/TrEMBL
      A0A6I8QKC0, A0A6I8RBD7, A0A6I8RGP1, A0A6I8RV19, F6ZWF3
      Related
      ENSXETP00000110641.1, ENSXETT00000117798.1
      Conserved Domains (2) summary
      pfam01532
      Location:189 → 628
      Glyco_hydro_47; Glycosyl hydrolase family 47
      cl21478
      Location:110 → 153
      ATP-synt_B; ATP synthase B/B' CF(0)
    Nucleotide Protein Strain
    Heading Accession and Version

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