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    mrpl22 mitochondrial ribosomal protein L22 [ Danio rerio (zebrafish) ]

    Gene ID: 100142645, updated on 27-Mar-2024

    Summary

    Official Symbol
    mrpl22provided by ZNC
    Official Full Name
    mitochondrial ribosomal protein L22provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-080303-28
    See related
    Ensembl:ENSDARG00000109961 AllianceGenome:ZFIN:ZDB-GENE-080303-28
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:171911
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosome assembly. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL22 (mitochondrial ribosomal protein L22). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (36386790..36396269, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (36701610..36711089, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438242 Neighboring gene putative protein TPRXL Neighboring gene gem (nuclear organelle) associated protein 5 Neighboring gene CCR4-NOT transcription complex, subunit 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    39S ribosomal protein L22, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122621.1NP_001116093.1  39S ribosomal protein L22, mitochondrial

      See identical proteins and their annotated locations for NP_001116093.1

      Status: PROVISIONAL

      Source sequence(s)
      BC159118
      UniProtKB/TrEMBL
      B0JZC1
      Related
      ENSDARP00000146997.1, ENSDART00000183627.1
      Conserved Domains (1) summary
      pfam00237
      Location:75176
      Ribosomal_L22; Ribosomal protein L22p/L17e

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      36386790..36396269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)