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    pmm1 phosphomannomutase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100127589, updated on 8-Mar-2024

    Summary

    Official Symbol
    pmm1provided by Xenbase
    Official Full Name
    phosphomannomutase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-974466
    See related
    Ensembl:ENSXETG00000008692
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
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    Genomic context

    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (38336125..38353342, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (34962355..34979417, complement)

    Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene LITAF domain containing Neighboring gene calcium regulated heat stable protein 1 Neighboring gene transmembrane protein 186 Neighboring gene 4-aminobutyrate aminotransferase

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphomannomutase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within GDP-mannose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    phosphomannomutase 2
    NP_001106421.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001112950.2NP_001106421.1  phosphomannomutase 2

      See identical proteins and their annotated locations for NP_001106421.1

      Status: VALIDATED

      Source sequence(s)
      AAMC04000009
      UniProtKB/TrEMBL
      A8E4X1, F6X676
      Related
      ENSXETP00000019024.5, ENSXETT00000019024.5
      Conserved Domains (1) summary
      cd02585
      Location:7243
      HAD_PMM; phosphomannomutase, similar to human PMM1 and PMM2, Saccharomyces Sec53p, and Arabidopsis thaliana PMM

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      38336125..38353342 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)