U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    gem GTP binding protein overexpressed in skeletal muscle [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100038040, updated on 8-Mar-2024

    Summary

    Official Symbol
    gemprovided by Xenbase
    Official Full Name
    GTP binding protein overexpressed in skeletal muscleprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-483370
    See related
    Ensembl:ENSXETG00000014678
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    kir; xgem
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See gem in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (127871717..127880348, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (112857365..112866142, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene palmitoyltransferase ZDHHC2 pseudogene Neighboring gene cadherin 17 Neighboring gene RAD54 homolog B Neighboring gene vir like m6A methyltransferase associated Neighboring gene CBY1 interacting BAR domain containing 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTP binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium channel regulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein GEM
    NP_001090822.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001097353.1NP_001090822.1  GTP-binding protein GEM

      See identical proteins and their annotated locations for NP_001090822.1

      Status: PROVISIONAL

      Source sequence(s)
      BC121659
      UniProtKB/TrEMBL
      F7CID2, Q0V9B4
      Related
      ENSXETP00000032158.4, ENSXETT00000032158.5
      Conserved Domains (1) summary
      cd04148
      Location:79299
      RGK; Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      127871717..127880348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)