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    Coa5 cytochrome C oxidase assembly factor 5 [ Mus musculus (house mouse) ]

    Gene ID: 76178, updated on 23-May-2018

    Summary

    Official Symbol
    Coa5provided by MGI
    Official Full Name
    cytochrome C oxidase assembly factor 5provided by MGI
    Primary source
    MGI:MGI:1923428
    See related
    Ensembl:ENSMUSG00000026112 Vega:OTTMUSG00000022117
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pet191; 1700001A24Rik; 6330578E17Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 45.9), mammary gland adult (RPKM 36.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Coa5 in Genome Data Viewer
    Location:
    1; 1 B
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (37417085..37430103, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (37473930..37486948, complement)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene cyclic nucleotide gated channel alpha 3 Neighboring gene RIKEN cDNA 4930439A04 gene Neighboring gene inositol polyphosphate-4-phosphatase, type I Neighboring gene unc-50 homolog Neighboring gene mannoside acetylglucosaminyltransferase 4, isoenzyme A Neighboring gene G1 to S phase transition pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    mitochondrial respiratory chain complex IV assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    cytochrome c oxidase assembly factor 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198006.4NP_932123.3  cytochrome c oxidase assembly factor 5

      See identical proteins and their annotated locations for NP_932123.3

      Status: VALIDATED

      Source sequence(s)
      AA616104, AK166651, BQ176168, BY779699, CN531814
      Consensus CDS
      CCDS35541.1
      UniProtKB/Swiss-Prot
      Q99M07
      Related
      ENSMUSP00000027286.6, OTTMUSP00000024901, ENSMUST00000027286.6, OTTMUST00000052497
      Conserved Domains (1) summary
      pfam10203
      Location:1171
      Pet191_N; Cytochrome c oxidase assembly protein PET191

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      37417085..37430103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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