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    Fastkd2 FAST kinase domains 2 [ Mus musculus (house mouse) ]

    Gene ID: 75619, updated on 3-Jun-2018
    Official Symbol
    Fastkd2provided by MGI
    Official Full Name
    FAST kinase domains 2provided by MGI
    Primary source
    MGI:MGI:1922869
    See related
    Ensembl:ENSMUSG00000025962 Vega:OTTMUSG00000013921
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2810421I24Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 6.3), CNS E11.5 (RPKM 5.2) and 24 other tissues See more
    Orthologs
    See Fastkd2 in Genome Data Viewer
    Location:
    1; 1 C2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (63730599..63753385)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (63777199..63799959)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene dystrotelin Neighboring gene malate dehydrogenase 1B, NAD (soluble) Neighboring gene RIKEN cDNA 4933402D24 gene Neighboring gene ribosomal protein S2 pseudogene

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    rRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cellular respiration ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    mitochondrial large ribosomal subunit assembly ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of mitochondrial translation ISO
    Inferred from Sequence Orthology
    more info
     
    ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    intercellular bridge ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial nucleoid ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    ribonucleoprotein granule ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    FAST kinase domain-containing protein 2, mitochondrial

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172422.3NP_766010.1  FAST kinase domain-containing protein 2, mitochondrial

      See identical proteins and their annotated locations for NP_766010.1

      Status: VALIDATED

      Source sequence(s)
      AK035322, AK084971, AK148224
      Consensus CDS
      CCDS15001.1
      UniProtKB/Swiss-Prot
      Q922E6
      Related
      ENSMUSP00000027103.6, OTTMUSP00000014826, ENSMUST00000027103.6, OTTMUST00000033153
      Conserved Domains (3) summary
      smart00952
      Location:619675
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:443512
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:561596
      FAST_2; FAST kinase-like protein, subdomain 2

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      63730599..63753385
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496313.2XP_006496376.2  FAST kinase domain-containing protein 2, mitochondrial isoform X1

      Conserved Domains (3) summary
      smart00952
      Location:584640
      RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
      pfam06743
      Location:408477
      FAST_1; FAST kinase-like protein, subdomain 1
      pfam08368
      Location:526561
      FAST_2; FAST kinase-like protein, subdomain 2
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