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    Cdk5r2 cyclin-dependent kinase 5, regulatory subunit 2 (p39) [ Mus musculus (house mouse) ]

    Gene ID: 12570, updated on 9-Sep-2018

    Summary

    Official Symbol
    Cdk5r2provided by MGI
    Official Full Name
    cyclin-dependent kinase 5, regulatory subunit 2 (p39)provided by MGI
    Primary source
    MGI:MGI:1330828
    See related
    Ensembl:ENSMUSG00000090071 Vega:OTTMUSG00000034759
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    p39; B230310J22Rik
    Orthologs

    Genomic context

    See Cdk5r2 in Genome Data Viewer
    Location:
    1; 1 C4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (74855029..74857732)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (74901603..74904306)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA glycine 3 (anticodon GCC) Neighboring gene predicted gene, 32275 Neighboring gene predicted gene 16582 Neighboring gene FEV (ETS oncogene family) Neighboring gene crystallin, beta A2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    actin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    cyclin-dependent protein kinase 5 activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cyclin-dependent protein kinase 5 activator activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cyclin-dependent protein kinase 5 activator activity TAS
    Traceable Author Statement
    more info
    PubMed 
    cytoskeletal protein binding TAS
    Traceable Author Statement
    more info
    PubMed 
    lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cerebellum development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    hippocampus development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    layer formation in cerebral cortex IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    neuron migration IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    positive regulation of calcium ion-dependent exocytosis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of protein kinase activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    superior olivary nucleus maturation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    growth cone ISO
    Inferred from Sequence Orthology
    more info
     
    membrane ISO
    Inferred from Sequence Orthology
    more info
     
    neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase 5 complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cyclin-dependent kinase 5 activator 2
    Names
    CDK5 activator 2
    cyclin-dependent kinase 5 regulatory subunit 2
    p39I

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009872.3NP_034002.2  cyclin-dependent kinase 5 activator 2

      See identical proteins and their annotated locations for NP_034002.2

      Status: VALIDATED

      Source sequence(s)
      AC139023
      Consensus CDS
      CCDS48290.1
      UniProtKB/Swiss-Prot
      O35926
      Related
      ENSMUSP00000125322.2, OTTMUSP00000048123, ENSMUST00000160379.3, OTTMUST00000088334
      Conserved Domains (1) summary
      pfam03261
      Location:51329
      CDK5_activator; Cyclin-dependent kinase 5 activator protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      74855029..74857732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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