Format

Send to:

Choose Destination
    • Showing Current items.

    Suox sulfite oxidase [ Mus musculus (house mouse) ]

    Gene ID: 211389, updated on 12-Aug-2018

    Summary

    Official Symbol
    Suoxprovided by MGI
    Official Full Name
    sulfite oxidaseprovided by MGI
    Primary source
    MGI:MGI:2446117
    See related
    Ensembl:ENSMUSG00000049858
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SO
    Expression
    Broad expression in large intestine adult (RPKM 75.1), genital fat pad adult (RPKM 64.7) and 23 other tissues See more
    Orthologs

    Genomic context

    See Suox in Genome Data Viewer
    Location:
    10; 10 D3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 10 NC_000076.6 (128669887..128673918, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (128106943..128110974, complement)

    Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein S26 Neighboring gene IKAROS family zinc finger 4 Neighboring gene predicted gene, 26876 Neighboring gene ribosomal protein L12 pseudogene Neighboring gene RAB5B, member RAS oncogene family

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC28458

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    heme binding ISO
    Inferred from Sequence Orthology
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molybdenum ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molybdopterin cofactor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    molybdopterin cofactor binding ISO
    Inferred from Sequence Orthology
    more info
     
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    sulfite oxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    sulfite oxidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    nitrate assimilation IEA
    Inferred from Electronic Annotation
    more info
     
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    response to nutrient ISO
    Inferred from Sequence Orthology
    more info
     
    sulfur compound metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial intermembrane space ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    sulfite oxidase, mitochondrial
    NP_776094.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173733.3NP_776094.2  sulfite oxidase, mitochondrial precursor

      See identical proteins and their annotated locations for NP_776094.2

      Status: VALIDATED

      Source sequence(s)
      AC117232
      Consensus CDS
      CCDS24285.1
      UniProtKB/Swiss-Prot
      Q8R086
      Related
      ENSMUSP00000056195.7, ENSMUST00000054764.8
      Conserved Domains (3) summary
      PLN00177
      Location:169544
      PLN00177; sulfite oxidase; Provisional
      cd02111
      Location:186544
      eukary_SO_Moco; molybdopterin binding domain of sulfite oxidase (SO). SO catalyzes the terminal reaction in the oxidative degradation of the sulfur-containing amino acids cysteine and methionine. Common features of all known members of the sulfite oxidase (SO) family of ...
      pfam00173
      Location:85161
      Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000076.6 Reference GRCm38.p4 C57BL/6J

      Range
      128669887..128673918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center