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    LOC18424920 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [ Amborella trichopoda ]

    Gene ID: 18424920, updated on 3-Jun-2019

    Summary

    Gene symbol
    LOC18424920
    Gene description
    putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial
    Locus tag
    AMTR_s00074p00172740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella

    Genomic context

    See LOC18424920 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006495778.1 (2806177..2808559)

    NW_006495778.1Genomic Context describing neighboring genes Neighboring gene GDSL esterase/lipase At4g26790 Neighboring gene pentatricopeptide repeat-containing protein At1g62670, mitochondrial Neighboring gene putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial Neighboring gene lysM domain receptor-like kinase 3 Neighboring gene pentatricopeptide repeat-containing protein At1g63400 Neighboring gene DNA-directed RNA polymerase II subunit 4 Neighboring gene uncharacterized LOC110006422

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_006495778.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    General protein information

    Preferred Names
    putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006495778.1 Reference AMTR1.0 Primary Assembly

      Range
      2806177..2808559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020661781.1XP_020517440.1  putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial

      Conserved Domains (2) summary
      sd00004
      Location:1239
      PPR; PPR repeat [structural motif]
      cl25449
      Location:8233
      PPR_2; PPR repeat family
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