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    Pold3 DNA polymerase delta 3, accessory subunit [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101708160, updated on 20-Jun-2018

    Summary

    Gene symbol
    Pold3
    Gene description
    DNA polymerase delta 3, accessory subunit
    Locus tag
    GW7_02092
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs

    Genomic context

    See Pold3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624817.1 (2465809..2538723, complement)

    NW_004624817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110345575 Neighboring gene chordin like 2 Neighboring gene leptin receptor overlapping transcript-like 1 pseudogene Neighboring gene calcyclin-binding protein pseudogene Neighboring gene lipoyl(octanoyl) transferase 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_004624817 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Base excision repair, organism-specific biosystem (from KEGG)
      Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
    • Base excision repair, conserved biosystem (from KEGG)
      Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
    • DNA polymerase delta complex, organism-specific biosystem (from KEGG)
      DNA polymerase delta complex, organism-specific biosystemStructural complex; Genetic information processing; DNA polymerase
    • DNA polymerase delta complex, conserved biosystem (from KEGG)
      DNA polymerase delta complex, conserved biosystemStructural complex; Genetic information processing; DNA polymerase
    • DNA replication, organism-specific biosystem (from KEGG)
      DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
    • DNA replication, conserved biosystem (from KEGG)
      DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
    • HTLV-I infection, organism-specific biosystem (from KEGG)
      HTLV-I infection, organism-specific biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • HTLV-I infection, conserved biosystem (from KEGG)
      HTLV-I infection, conserved biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • Homologous recombination, organism-specific biosystem (from KEGG)
      Homologous recombination, organism-specific biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
    • Homologous recombination, conserved biosystem (from KEGG)
      Homologous recombination, conserved biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
    • Metabolic pathways, organism-specific biosystem (from KEGG)
      Metabolic pathways, organism-specific biosystem
      Metabolic pathways
    • Mismatch repair, organism-specific biosystem (from KEGG)
      Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
    • Mismatch repair, conserved biosystem (from KEGG)
      Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
    • Nucleotide excision repair, organism-specific biosystem (from KEGG)
      Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
    • Nucleotide excision repair, conserved biosystem (from KEGG)
      Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
    • Purine metabolism, organism-specific biosystem (from KEGG)
      Purine metabolism, organism-specific biosystem
      Purine metabolism
    • Purine metabolism, conserved biosystem (from KEGG)
      Purine metabolism, conserved biosystem
      Purine metabolism
    • Pyrimidine metabolism, organism-specific biosystem (from KEGG)
      Pyrimidine metabolism, organism-specific biosystem
      Pyrimidine metabolism
    • Pyrimidine metabolism, conserved biosystem (from KEGG)
      Pyrimidine metabolism, conserved biosystem
      Pyrimidine metabolism

    General protein information

    Preferred Names
    DNA polymerase delta subunit 3
    Names
    polymerase (DNA-directed), delta 3, accessory subunit

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624817.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      2465809..2538723 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021243184.1XP_021098843.1  DNA polymerase delta subunit 3 isoform X3

      Conserved Domains (1) summary
      pfam09507
      Location:1428
      CDC27; DNA polymerase subunit Cdc27
    2. XM_004863238.3XP_004863295.1  DNA polymerase delta subunit 3 isoform X1

      UniProtKB/TrEMBL
      A0A0P6JHZ9
      Conserved Domains (1) summary
      pfam09507
      Location:19467
      CDC27; DNA polymerase subunit Cdc27
    3. XM_004863242.3XP_004863299.1  DNA polymerase delta subunit 3 isoform X3

      See identical proteins and their annotated locations for XP_004863299.1

      Conserved Domains (1) summary
      pfam09507
      Location:1428
      CDC27; DNA polymerase subunit Cdc27
    4. XM_004863240.3XP_004863297.1  DNA polymerase delta subunit 3 isoform X3

      See identical proteins and their annotated locations for XP_004863297.1

      Conserved Domains (1) summary
      pfam09507
      Location:1428
      CDC27; DNA polymerase subunit Cdc27
    5. XM_021243186.1XP_021098845.1  DNA polymerase delta subunit 3 isoform X3

      Conserved Domains (1) summary
      pfam09507
      Location:1428
      CDC27; DNA polymerase subunit Cdc27
    6. XM_021243185.1XP_021098844.1  DNA polymerase delta subunit 3 isoform X3

      Conserved Domains (1) summary
      pfam09507
      Location:1428
      CDC27; DNA polymerase subunit Cdc27
    7. XM_021243183.1XP_021098842.1  DNA polymerase delta subunit 3 isoform X2

      Conserved Domains (1) summary
      pfam09507
      Location:19448
      CDC27; DNA polymerase subunit Cdc27
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