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    LOC100848138 protocadherin beta-16 [ Bos taurus (cattle) ]

    Gene ID: 100848138, updated on 19-Jan-2019

    Summary

    Gene symbol
    LOC100848138
    Gene description
    protocadherin beta-16
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PCDHB16

    Genomic context

    See LOC100848138 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 7 NC_037334.1 (52302054..52305301)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 7 AC_000164.1 (53985234..53988492)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene protocadherin beta-7 Neighboring gene protocadherin beta 8 Neighboring gene protocadherin beta-10-like Neighboring gene protocadherin beta-12

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      52302054..52305301
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003586303.5XP_003586351.1  protocadherin beta-16

      See identical proteins and their annotated locations for XP_003586351.1

      Conserved Domains (3) summary
      cd11304
      Location:247343
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:33112
      Cadherin_2; Cadherin-like
      pfam16492
      Location:687769
      Cadherin_C_2; Cadherin cytoplasmic C-terminal
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