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    CDC27 cell division cycle 27 [ Equus caballus (horse) ]

    Gene ID: 100054552, updated on 14-Jan-2019

    Summary

    Official Symbol
    CDC27provided by VGNC
    Official Full Name
    cell division cycle 27provided by VGNC
    Primary source
    VGNC:VGNC:49337
    See related
    Ensembl:ENSECAG00000009635
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs

    Genomic context

    See CDC27 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (17346343..17413710)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 11 NC_009154.2 (17299500..17366406)

    Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 13 Neighboring gene integrin subunit beta 3 Neighboring gene myosin light chain 4 Neighboring gene KAT8 regulatory NSL complex subunit 1 Neighboring gene microtubule associated protein tau Neighboring gene uncharacterized LOC111775621

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • APC/C complex, organism-specific biosystem (from KEGG)
      APC/C complex, organism-specific biosystemStructural complex; Genetic information processing; Ubiquitin system
    • APC/C complex, conserved biosystem (from KEGG)
      APC/C complex, conserved biosystemStructural complex; Genetic information processing; Ubiquitin system
    • Cell cycle, organism-specific biosystem (from KEGG)
      Cell cycle, organism-specific biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
    • Cell cycle, conserved biosystem (from KEGG)
      Cell cycle, conserved biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
    • HTLV-I infection, organism-specific biosystem (from KEGG)
      HTLV-I infection, organism-specific biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • HTLV-I infection, conserved biosystem (from KEGG)
      HTLV-I infection, conserved biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • Oocyte meiosis, organism-specific biosystem (from KEGG)
      Oocyte meiosis, organism-specific biosystemDuring meiosis, a single round of DNA replication is followed by two rounds of chromosome segregation, called meiosis I and meiosis II. At meiosis I, homologous chromosomes recombine and then segrega...
    • Oocyte meiosis, conserved biosystem (from KEGG)
      Oocyte meiosis, conserved biosystemDuring meiosis, a single round of DNA replication is followed by two rounds of chromosome segregation, called meiosis I and meiosis II. At meiosis I, homologous chromosomes recombine and then segrega...
    • Progesterone-mediated oocyte maturation, organism-specific biosystem (from KEGG)
      Progesterone-mediated oocyte maturation, organism-specific biosystemXenopus oocytes are naturally arrested at G2 of meiosis I. Exposure to either insulin/IGF-1 or the steroid hormone progesterone breaks this arrest and induces resumption of the two meiotic division c...
    • Progesterone-mediated oocyte maturation, conserved biosystem (from KEGG)
      Progesterone-mediated oocyte maturation, conserved biosystemXenopus oocytes are naturally arrested at G2 of meiosis I. Exposure to either insulin/IGF-1 or the steroid hormone progesterone breaks this arrest and induces resumption of the two meiotic division c...
    • Ubiquitin mediated proteolysis, organism-specific biosystem (from KEGG)
      Ubiquitin mediated proteolysis, organism-specific biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...
    • Ubiquitin mediated proteolysis, conserved biosystem (from KEGG)
      Ubiquitin mediated proteolysis, conserved biosystemProtein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to protein...

    General protein information

    Preferred Names
    cell division cycle protein 27 homolog
    Names
    cell division cycle 27 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009154.3 Reference EquCab3.0 Primary Assembly

      Range
      17346343..17413710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023652321.1XP_023508089.1  cell division cycle protein 27 homolog isoform X1

      Conserved Domains (3) summary
      COG0457
      Location:508769
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:574602
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    2. XM_023652325.1XP_023508093.1  cell division cycle protein 27 homolog isoform X4

      Conserved Domains (3) summary
      COG0457
      Location:508769
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:574602
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    3. XM_023652328.1XP_023508096.1  cell division cycle protein 27 homolog isoform X8

      Conserved Domains (3) summary
      COG0457
      Location:508768
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:574602
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    4. XM_023652327.1XP_023508095.1  cell division cycle protein 27 homolog isoform X8

      Conserved Domains (3) summary
      COG0457
      Location:508768
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:574602
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    5. XM_023652322.1XP_023508090.1  cell division cycle protein 27 homolog isoform X2

      Conserved Domains (3) summary
      COG0457
      Location:507768
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:573601
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    6. XM_023652326.1XP_023508094.1  cell division cycle protein 27 homolog isoform X5

      Conserved Domains (3) summary
      COG0457
      Location:507768
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:573601
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    7. XM_023652324.1XP_023508092.1  cell division cycle protein 27 homolog isoform X3

      Conserved Domains (3) summary
      COG0457
      Location:502763
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:568596
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    8. XM_001501543.6XP_001501593.1  cell division cycle protein 27 homolog isoform X6

      See identical proteins and their annotated locations for XP_001501593.1

      UniProtKB/TrEMBL
      F6RN71
      Related
      ENSECAP00000008011.1, ENSECAT00000010389.2
      Conserved Domains (5) summary
      COG0457
      Location:502763
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:568596
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:636668
      TPR_1; Tetratricopeptide repeat
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam13424
      Location:458529
      TPR_12; Tetratricopeptide repeat
    9. XM_005597297.3XP_005597354.1  cell division cycle protein 27 homolog isoform X9

      Conserved Domains (5) summary
      COG0457
      Location:502762
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:568596
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:636668
      TPR_1; Tetratricopeptide repeat
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam13424
      Location:458529
      TPR_12; Tetratricopeptide repeat
    10. XM_005597296.3XP_005597353.1  cell division cycle protein 27 homolog isoform X7

      See identical proteins and their annotated locations for XP_005597353.1

      Conserved Domains (5) summary
      COG0457
      Location:501762
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:567595
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:635667
      TPR_1; Tetratricopeptide repeat
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
      pfam13424
      Location:458528
      TPR_12; Tetratricopeptide repeat
    11. XM_023652329.1XP_023508097.1  cell division cycle protein 27 homolog isoform X10

      Conserved Domains (3) summary
      COG0457
      Location:501761
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:567595
      TPR; TPR repeat [structural motif]
      pfam12895
      Location:1792
      ANAPC3; Anaphase-promoting complex, cyclosome, subunit 3
    12. XM_023652331.1XP_023508099.1  cell division cycle protein 27 homolog isoform X11

      Conserved Domains (3) summary
      COG0457
      Location:405666
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:471499
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:361432
      TPR_12; Tetratricopeptide repeat
    13. XM_023652332.1XP_023508100.1  cell division cycle protein 27 homolog isoform X12

      Conserved Domains (2) summary
      COG0457
      Location:405666
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:471499
      TPR; TPR repeat [structural motif]

    RNA

    1. XR_002811400.1 RNA Sequence

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