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    LOC105447117 telomerase reverse transcriptase-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 105447117, updated on 30-Sep-2019

    Summary

    Gene symbol
    LOC105447117
    Gene description
    telomerase reverse transcriptase-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
    Also known as
    TERT; TERT-L; TERT-S

    Genomic context

    See LOC105447117 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145597.1 (21624092..21653330)

    NW_022145597.1Genomic Context describing neighboring genes Neighboring gene fibropellin-3 Neighboring gene THAP domain-containing protein 4 Neighboring gene formin-like protein 5 Neighboring gene unconventional myosin-XVI Neighboring gene autophagy-related protein 16

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_022145597 Unplaced Scaffold Reference Spur_5.0 Primary Assembly

    General protein information

    Preferred Names
    telomerase reverse transcriptase-long
    Names
    telomerase reverse transcriptase-
    NP_001123288.3
    XP_030837208.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001129816.3NP_001123288.3  telomerase reverse transcriptase-long isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate exon resulting in a shorter transcript, compared to variant 1
      Source sequence(s)
      AAGJ05125008, AAGJ05125009
    2. NM_001172051.1NP_001165522.1  telomerase reverse transcriptase-long isoform 1

      See identical proteins and their annotated locations for NP_001165522.1

      Status: PROVISIONAL

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      FJ615756
      UniProtKB/TrEMBL
      B8YR06

    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145597.1 Reference Spur_5.0 Primary Assembly

      Range
      21624092..21653330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030981348.1XP_030837208.1  telomerase reverse transcriptase-long isoform X1

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