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    Zfp157 zinc finger protein 157 [ Mus musculus (house mouse) ]

    Gene ID: 72154, updated on 4-Feb-2018
    Official Symbol
    Zfp157provided by MGI
    Official Full Name
    zinc finger protein 157provided by MGI
    Primary source
    MGI:MGI:1919404
    See related
    Ensembl:ENSMUSG00000036898 Vega:OTTMUSG00000022795
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Roma; mszf12; AI327407; mszf23-1; 2610020C11Rik; A630094N24Rik
    Expression
    Broad expression in CNS E18 (RPKM 5.4), CNS E14 (RPKM 5.4) and 22 other tissues See more
    Location:
    5; 5 G2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (138441458..138460900)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (138882704..138901922)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene glutamatic-oxaloacetic transaminase 2, mitochondrial, pseudogene 1 Neighboring gene cytochrome P450, family 3, subfamily a, member 61, pseudogene 1 Neighboring gene mortality factor 4 like 1 pseudogene Neighboring gene vomeronasal 2, receptor, pseudogene 24

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    DNA binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    lung alveolus development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    mammary gland morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of cell fate commitment IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028130.3NP_082406.2  zinc finger protein 157

      See identical proteins and their annotated locations for NP_082406.2

      Status: VALIDATED

      Source sequence(s)
      AI789072, BC059261
      Consensus CDS
      CCDS39345.1
      UniProtKB/TrEMBL
      Q6PCM4
      Related
      ENSMUSP00000083018.5, OTTMUSP00000026164, ENSMUST00000085856.11, OTTMUST00000054762
      Conserved Domains (6) summary
      smart00349
      Location:464
      KRAB; krueppel associated box
      COG5048
      Location:181535
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:381401
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:435457
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:443
      KRAB; KRAB box
      pfam13465
      Location:366388
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      138441458..138460900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006504627.3XP_006504690.1  zinc finger protein 157 isoform X3

      Conserved Domains (3) summary
      COG5048
      Location:68396
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:268288
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:253275
      zf-H2C2_2; Zinc-finger double domain
    2. XM_006504625.3XP_006504688.1  zinc finger protein 157 isoform X1

      Conserved Domains (6) summary
      smart00349
      Location:1979
      KRAB; krueppel associated box
      COG5048
      Location:196550
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:396416
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:450472
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:1958
      KRAB; KRAB box
      pfam13465
      Location:381403
      zf-H2C2_2; Zinc-finger double domain
    3. XM_006504626.3XP_006504689.1  zinc finger protein 157 isoform X2

      Conserved Domains (3) summary
      COG5048
      Location:88416
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:288308
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:273295
      zf-H2C2_2; Zinc-finger double domain
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