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    Zfyve21 zinc finger, FYVE domain containing 21 [ Mus musculus (house mouse) ]

    Gene ID: 68520, updated on 24-Apr-2018
    Official Symbol
    Zfyve21provided by MGI
    Official Full Name
    zinc finger, FYVE domain containing 21provided by MGI
    Primary source
    MGI:MGI:1915770
    See related
    Ensembl:ENSMUSG00000021286
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C85416; AW558780; 1110013H04Rik
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 52.9), ovary adult (RPKM 50.4) and 28 other tissues See more
    Orthologs
    See Zfyve21 in Genome Data Viewer
    Location:
    12; 12 F1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (111814169..111828388)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (113052481..113066287)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene apoptogenic, mitochondrial 1 Neighboring gene BCL2-associated athanogene 5 Neighboring gene kinesin light chain 1 Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 3 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 13B Neighboring gene NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 pseudogene Neighboring gene predicted gene, 40898

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cellular_component ND
    No biological Data available
    more info
     
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    zinc finger FYVE domain-containing protein 21

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026752.4NP_081028.3  zinc finger FYVE domain-containing protein 21

      See identical proteins and their annotated locations for NP_081028.3

      Status: VALIDATED

      Source sequence(s)
      AC152065, BC132248
      Consensus CDS
      CCDS56865.1
      UniProtKB/Swiss-Prot
      Q8VCM3
      Related
      ENSMUSP00000021714.7, ENSMUST00000021714.8
      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108229
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      111814169..111828388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516192.3XP_006516255.1  zinc finger FYVE domain-containing protein 21 isoform X1

      UniProtKB/TrEMBL
      A0A1Y7VNH4
      Related
      ENSMUSP00000152422.1, ENSMUST00000221375.1
      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108248
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
    2. XM_006516194.3XP_006516257.1  zinc finger FYVE domain-containing protein 21 isoform X3

      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108247
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
    3. XM_006516193.3XP_006516256.1  zinc finger FYVE domain-containing protein 21 isoform X2

      Related
      ENSMUSP00000152558.1, ENSMUST00000223211.1
      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108247
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
    4. XM_006516195.3XP_006516258.1  zinc finger FYVE domain-containing protein 21 isoform X4

      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108246
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
    5. XM_011244168.1XP_011242470.1  zinc finger FYVE domain-containing protein 21 isoform X5

      Conserved Domains (2) summary
      cd15727
      Location:38101
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:108228
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
    6. XM_006516196.3XP_006516259.1  zinc finger FYVE domain-containing protein 21 isoform X6

      Conserved Domains (2) summary
      cd15727
      Location:151
      FYVE_ZF21; FYVE domain found in zinc finger FYVE domain-containing protein 21 (ZF21) and similar proteins
      pfam16696
      Location:58198
      ZFYVE21_C; Zinc finger FYVE domain-containing protein 21 C-terminus
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