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    CPXCR1 CPX chromosome region, candidate 1 [ Homo sapiens (human) ]

    Gene ID: 53336, updated on 29-Mar-2018
    Official Symbol
    CPXCR1provided by HGNC
    Official Full Name
    CPX chromosome region, candidate 1provided by HGNC
    Primary source
    HGNC:HGNC:2332
    See related
    Ensembl:ENSG00000147183 Vega:OTTHUMG00000021950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CT77
    Summary
    This gene is one of several genes identified in a region of the X chromosome associated with an X-linked cleft palate (CPX) disorder. The encoded protein contains a motif similar to a motif found in zinc-finger proteins. Mutation analysis of this gene has not revealed any mutation which causes the CPX disorder. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Sep 2011]
    Expression
    Restricted expression toward testis (RPKM 3.8) See more
    Orthologs
    Location:
    Xq21.31
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) X NC_000023.11 (88747225..88754785)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (88002226..88009786)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene capping actin protein of muscle Z-line alpha subunit 1 pseudogene Neighboring gene uncharacterized LOC107985713 Neighboring gene uncharacterized LOC107985653 Neighboring gene sorcin pseudogene 2

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    CPX chromosomal region candidate gene 1 protein
    Names
    cancer/testis antigen 77

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021312.1 RefSeqGene

      Range
      5001..12561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184771.1NP_001171700.1  CPX chromosomal region candidate gene 1 protein

      See identical proteins and their annotated locations for NP_001171700.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AF284767, AK098646, BU570042
      Consensus CDS
      CCDS14458.1
      UniProtKB/Swiss-Prot
      Q8N123
      Related
      ENSP00000362203.1, OTTHUMP00000023635, ENST00000373111.5, OTTHUMT00000057419
    2. NM_033048.5NP_149037.4  CPX chromosomal region candidate gene 1 protein

      See identical proteins and their annotated locations for NP_149037.4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AF284767, BU570042
      Consensus CDS
      CCDS14458.1
      UniProtKB/Swiss-Prot
      Q8N123
      Related
      ENSP00000276127.4, OTTHUMP00000023634, ENST00000276127.8, OTTHUMT00000057418

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p12 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p12 Primary Assembly

      Range
      88747225..88754785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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