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    GB1 GTP-binding protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835297, updated on 5-Aug-2018

    Summary

    Gene symbol
    GB1
    Gene description
    GTP-binding protein 1
    Primary source
    Araport:AT5G52210
    Locus tag
    AT5G52210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATARLB1; ATGB1; F17P19.11; F17P19_11; GTP-binding protein 1; GTP-BINDING PROTEIN ATGB1
    Summary
    A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.

    Genomic context

    See GB1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (21204991..21207098)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene homeodomain GLABROUS 7 Neighboring gene Sugar isomerase (SIS) family protein Neighboring gene phosphoprotein phosphatase inhibitor Neighboring gene ncRNA Neighboring gene chromosome transmission fidelity-like protein Neighboring gene methyl-CPG-binding domain protein 13 Neighboring gene membrane steroid binding protein 1

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    NM_124600.3
    NM_180844.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    GTP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    GTP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein 1
    NP_200034.1
    • GTP-binding protein 1 (GB1); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 10306 Blast hits to 10286 proteins in 478 species: Archae - 29; Bacteria - 165; Metazoa - 4931; Fungi - 1428; Plants - 1618; Viruses - 0; Other Eukaryotes - 2135 (source: NCBI BLink).
    NP_851175.1
    • GTP-binding protein 1 (GB1); FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor A1F (TAIR:AT1G10630.1); Has 10316 Blast hits to 10296 proteins in 478 species: Archae - 30; Bacteria - 165; Metazoa - 4935; Fungi - 1433; Plants - 1618; Viruses - 0; Other Eukaryotes - 2135 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21204991..21207098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180844.2NP_851175.1  GTP-binding protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851175.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPG8, Q38921
      Conserved Domains (2) summary
      smart00175
      Location:18181
      RAB; Rab subfamily of small GTPases
      cd04160
      Location:19183
      Arfrp1; Arf-related protein 1 (Arfrp1)
    2. NM_124600.3NP_200034.1  GTP-binding protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200034.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPG8, Q38921
      Conserved Domains (2) summary
      smart00175
      Location:18181
      RAB; Rab subfamily of small GTPases
      cd04160
      Location:19183
      Arfrp1; Arf-related protein 1 (Arfrp1)
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