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    tmcc2 transmembrane and coiled-coil domain family 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 780050, updated on 23-Dec-2019

    Summary

    Official Symbol
    tmcc2provided by Xenbase
    Official Full Name
    transmembrane and coiled-coil domain family 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-492260
    See related
    Ensembl:ENSXETG00000007803
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    hucep11
    Orthologs

    Genomic context

    See tmcc2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (72931388..72971200)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (64566613..64606095)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 6 Neighboring gene zinc finger, HIT-type containing 3 Neighboring gene NUAK family, SNF1-like kinase, 2 Neighboring gene kelch domain containing 8A

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Clone Names

    • MGC145941

    General protein information

    Preferred Names
    transmembrane and coiled-coil domains protein 2
    Names
    cerebral protein 11

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079127.1NP_001072595.1  transmembrane and coiled-coil domains protein 2

      See identical proteins and their annotated locations for NP_001072595.1

      Status: PROVISIONAL

      Source sequence(s)
      BC122963
      UniProtKB/TrEMBL
      Q0IHU7
      Related
      ENSXETP00000007646.1, ENSXETT00000018865.1
      Conserved Domains (1) summary
      pfam10267
      Location:301689
      Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      72931388..72971200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012965585.2XP_012821039.1  transmembrane and coiled-coil domains protein 2 isoform X1

      See identical proteins and their annotated locations for XP_012821039.1

      Conserved Domains (1) summary
      pfam10267
      Location:277665
      Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
    2. XM_012965582.3XP_012821036.1  transmembrane and coiled-coil domains protein 2 isoform X1

      See identical proteins and their annotated locations for XP_012821036.1

      Conserved Domains (1) summary
      pfam10267
      Location:277665
      Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
    3. XM_031896129.1XP_031751989.1  transmembrane and coiled-coil domains protein 2 isoform X1

    4. XM_031896130.1XP_031751990.1  transmembrane and coiled-coil domains protein 2 isoform X2

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