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    LOC744176 alcohol dehydrogenase 1C [ Pan troglodytes (chimpanzee) ]

    Gene ID: 744176, updated on 3-Apr-2018

    Summary

    Gene symbol
    LOC744176
    Gene description
    alcohol dehydrogenase 1C
    See related
    Ensembl:ENSPTRG00000039360
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ADH1C

    Genomic context

    See LOC744176 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 4 NC_036883.1 (96892466..96909009, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 4 NC_006471.3 (101805226..101821773, complement)

    Chromosome 4 - NC_036883.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104006141 Neighboring gene alcohol dehydrogenase 1A (class I), alpha polypeptide Neighboring gene alcohol dehydrogenase 1B (class I), beta polypeptide Neighboring gene uncharacterized LOC104006142 Neighboring gene uncharacterized LOC104006143 Neighboring gene alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    alcohol dehydrogenase 1C
    Names
    alcohol dehydrogenase 1C (class I), gamma polypeptide
    class I alcohol dehydrogenase, gamma subunit

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036883.1 Reference Clint_PTRv2 Primary Assembly

      Range
      96892466..96909009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001167004.3XP_001167004.2  alcohol dehydrogenase 1C isoform X2

      Related
      ENSPTRP00000063793.1, ENSPTRT00000106581.1
      Conserved Domains (2) summary
      cd08299
      Location:49421
      alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases
      COG1062
      Location:54421
      FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]
    2. XM_016951912.2XP_016807401.2  alcohol dehydrogenase 1C isoform X1

      Conserved Domains (1) summary
      cd08299
      Location:43378
      alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases
    3. XM_009448060.3XP_009446335.1  alcohol dehydrogenase 1C isoform X3

      Conserved Domains (2) summary
      cd08299
      Location:1335
      alcohol_DH_class_I_II_IV; class I, II, IV alcohol dehydrogenases
      COG1062
      Location:1335
      FrmA; Zn-dependent alcohol dehydrogenase [General function prediction only]
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