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    TSPAN8 tetraspanin 8 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 743174, updated on 7-Oct-2018

    Summary

    Official Symbol
    TSPAN8provided by VGNC
    Official Full Name
    tetraspanin 8provided by VGNC
    Primary source
    VGNC:VGNC:13485
    Locus tag
    CK820_G0041440
    See related
    Ensembl:ENSPTRG00000005222
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See TSPAN8 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 12 NC_036891.1 (68651863..68684903, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 12 NC_006479.3 (70933942..70966993, complement)

    Chromosome 12 - NC_036891.1Genomic Context describing neighboring genes Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2B pseudogene Neighboring gene protein tyrosine phosphatase, receptor type R Neighboring gene uncharacterized LOC107967572 Neighboring gene uncharacterized LOC107967573 Neighboring gene leucine rich repeat containing G protein-coupled receptor 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    tetraspanin-8
    Names
    transmembrane 4 superfamily member 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036891.1 Reference Clint_PTRv2 Primary Assembly

      Range
      68651863..68684903 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001157620.4XP_001157620.1  tetraspanin-8

      See identical proteins and their annotated locations for XP_001157620.1

      UniProtKB/TrEMBL
      H2Q6G8
      Related
      ENSPTRP00000008873.4
      Conserved Domains (1) summary
      cd03154
      Location:106205
      TM4SF3_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
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