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    SLU7 SLU7 homolog, splicing factor [ Pan troglodytes (chimpanzee) ]

    Gene ID: 737318, updated on 6-Oct-2018

    Summary

    Official Symbol
    SLU7provided by VGNC
    Official Full Name
    SLU7 homolog, splicing factorprovided by VGNC
    Primary source
    VGNC:VGNC:4166
    Locus tag
    CK820_G0010249
    See related
    Ensembl:ENSPTRG00000017491
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See SLU7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (138546984..138563273, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (161318355..161336222, complement)

    Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene C1q and TNF related 2 Neighboring gene zinc finger BED-type containing 8 Neighboring gene pituitary tumor-transforming 1 Neighboring gene microRNA 146a

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Spliceosome, organism-specific biosystem (from KEGG)
      Spliceosome, organism-specific biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...
    • Spliceosome, conserved biosystem (from KEGG)
      Spliceosome, conserved biosystemAfter transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, th...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    pre-mRNA-splicing factor SLU7
    Names
    SLU7 splicing factor homolog
    step II splicing factor SLU7

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001329720.1NP_001316649.1  pre-mRNA-splicing factor SLU7

      Status: VALIDATED

      Source sequence(s)
      GABF01008830
      UniProtKB/TrEMBL
      H2QRX9
      Conserved Domains (1) summary
      pfam11708
      Location:161434
      Slu7; Pre-mRNA splicing Prp18-interacting factor

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

      Range
      138546984..138563273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016954149.1XP_016809638.1  pre-mRNA-splicing factor SLU7 isoform X1

      UniProtKB/TrEMBL
      H2QRX9
      Related
      ENSPTRP00000029882.4, ENSPTRT00000032341.4
      Conserved Domains (1) summary
      pfam11708
      Location:161434
      Slu7; Pre-mRNA splicing Prp18-interacting factor
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