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    SNX8 sorting nexin 8 [ Bos taurus (cattle) ]

    Gene ID: 614344, updated on 17-Sep-2018

    Summary

    Official Symbol
    SNX8provided by VGNC
    Official Full Name
    sorting nexin 8provided by VGNC
    Primary source
    VGNC:VGNC:35114
    See related
    BGD:BT29242; Ensembl:ENSBTAG00000013708
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See SNX8 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 25 NC_037352.1 (40930408..40969289)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 25 AC_000182.1 (41480285..41519854)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIF19 Neighboring gene eukaryotic translation initiation factor 3 subunit B Neighboring gene nudix hydrolase 1 Neighboring gene mitotic arrest deficient 1 like 1 Neighboring gene mitochondrial rRNA methyltransferase 2

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Clone Names

    • MGC137391

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    phosphatidylinositol binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    early endosome to Golgi transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    intracellular protein transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    early endosome membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with retromer complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046533.2NP_001039998.1  sorting nexin-8

      See identical proteins and their annotated locations for NP_001039998.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112867
      UniProtKB/Swiss-Prot
      Q2KHV6
      Related
      ENSBTAP00000018213.3, ENSBTAT00000018213.3
      Conserved Domains (2) summary
      cd06866
      Location:70173
      PX_SNX8_Mvp1p_like; The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p
      cd07597
      Location:190435
      BAR_SNX8; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 8

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      40930408..40969289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024985024.1XP_024840792.1  sorting nexin-8 isoform X1

      Conserved Domains (2) summary
      cd06866
      Location:22125
      PX_SNX8_Mvp1p_like; The phosphoinositide binding Phox Homology domain of Sorting Nexin 8 and yeast Mvp1p
      cd07597
      Location:142387
      BAR_SNX8; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 8
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