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    phactr3b phosphatase and actin regulator 3b [ Danio rerio (zebrafish) ]

    Gene ID: 553558, updated on 1-Aug-2018

    Summary

    Official Symbol
    phactr3bprovided by ZNC
    Official Full Name
    phosphatase and actin regulator 3bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-156
    See related
    Ensembl:ENSDARG00000019304 Vega:OTTDARG00000033632
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:109967
    Orthologs

    Genomic context

    See phactr3b in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (1422737..1509775, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (1396149..1483185, complement)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene si:ch211-266k22.6 Neighboring gene protein phosphatase 1, regulatory subunit 3Db Neighboring gene acyl-CoA thioesterase 8 Neighboring gene serine/arginine-rich splicing factor 6b

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Clone Names

    • MGC109967

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphatase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    phosphatase and actin regulator 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020537.1NP_001018373.1  phosphatase and actin regulator 3

      See identical proteins and their annotated locations for NP_001018373.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095090
      UniProtKB/TrEMBL
      Q504B7
      Related
      ENSDARP00000050761.7, OTTDARP00000037198, ENSDART00000050762.10, OTTDART00000047342
      Conserved Domains (1) summary
      smart00707
      Location:406430
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      1422737..1509775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009305736.3XP_009304011.1  phosphatase and actin regulator 3 isoform X2

      Conserved Domains (1) summary
      smart00707
      Location:413437
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    2. XM_021479616.1XP_021335291.1  phosphatase and actin regulator 3 isoform X1

      Conserved Domains (1) summary
      smart00707
      Location:416440
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    3. XM_021479617.1XP_021335292.1  phosphatase and actin regulator 3 isoform X3

      Conserved Domains (1) summary
      smart00707
      Location:409433
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
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