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    TUB tubby bipartite transcription factor [ Bos taurus (cattle) ]

    Gene ID: 539051, updated on 27-Aug-2018

    Summary

    Official Symbol
    TUBprovided by VGNC
    Official Full Name
    tubby bipartite transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:36503
    See related
    BGD:BT23036; Ensembl:ENSBTAG00000004862
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See TUB in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 15 NC_037342.1 (44432494..44457939, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 15 AC_000172.1 (45033763..45055126, complement)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 33 Neighboring gene LIM domain only 1 Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene NLR family pyrin domain containing 10

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    tubby protein homolog
    Names
    tubby homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192160.2NP_001179089.1  tubby protein homolog

      See identical proteins and their annotated locations for NP_001179089.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000015
      UniProtKB/TrEMBL
      E1B8A6
      Related
      ENSBTAP00000006391.3, ENSBTAT00000006391.3
      Conserved Domains (2) summary
      pfam01167
      Location:260501
      Tub; Tub family
      pfam16322
      Location:29239
      Tub_N; Tubby N-terminal

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      44432494..44457939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024975443.1XP_024831211.1  tubby protein homolog isoform X1

      Conserved Domains (2) summary
      pfam01167
      Location:260501
      Tub; Tub family
      pfam16322
      Location:29239
      Tub_N; Tubby N-terminal
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